APBC2003 Accepted papers

              The First Asia-Pacific Bioinformatics Conference

 

Session Title

Title of Paper

Author

 

 

 

 

 

Keynote Speaker: Limsoon Wong

From Informatics to Bioinformatics

Vladimir B. Bajic, Vladimir Brusic, Jinyan Li, See-Kiong Ng & Limsoon Wong

 

 

 

 

 

S1. Data Mining in Bioinformatics

Model-Based Clustering in Gene Expression Microarrays: an Application to Breast Cancer Data

J.C. Mar & G.J. McLachlan

 

 

Gene Expression Data Clustering and Visualization using a Binary Hierarchical Clustering Framework

Lap Keung Szeto, Alan Wee-Chung Liew, Hong Yan & Sy-sen Tang

 

 

Feature Space Transformation and Decision Results Interpretation,

Jinyan Li & Hwee-Leng Ong

 

 

 

 

 

S2. Nural Network & Machine Learning in Bioinformatics

A Generic Connectionist-Based Method for On-Line Feature Selection and Modelling with a Case Study of Gene Expression Data Analysis

N. Kasabov, M. Middlemiss & T. Lane

 

 

Analysing MEG-Data by a combination of different Neural Networks

M. Borschbach, W.-M. Lippe, C. Mertens & S. Niendieck

 

 

Machine Learning In DNA Microarray Analysis for Cancer Classification

Sung-Bae Cho & Hone-Hee Won

 

 

 

 

 

S3. Framework & Platform in Bioinformatics

A framework for improving protein structure predictions by teamwork

Luigi Palopoli & Giorgio Terracina

 

 

A Platform for the Description, Distribution and Analysis of Genetic Polymorphism Data

Greg D. Tyrelle & Garry C. King

 

 

Towards an understanding of protein-protein interaction network hierarchies. Analysis of DnaN -binding peptide motifs in members of protein families interacting with the eubacterial processivity clamp, the   subunit of DNA Polymerase III.

Brian P. Dalrymple, Gene Wijffels, Kritaya Kongsuwan & Phil Jennings

 

 

 

 

 

S4. Bioinformatics Visualization (1)

The Visualization and Measurement of Left Ventricular Deformation

Burkhard Wuensche

 

 

Comparison of Metabolic Pathways using Constraint Graph Drawing

Falk Schreiber

 

 

Visualization of DNA Sequences by Use of Three-Dimensional
Trajectory

Hsuan T. Chang, Nen W. Lo, Wei C. Lu, & Chung J. Kuo

 

 

 

 

 

S5. Bioinformatics Visualization (2)

Multiple Molecular Dynamics Simulaitons of a 28-mer oligopeptide reveal enhanced sampling of conformational space

Sangeeta Sawant & A.S. Kolaskar

 

 

Microarray Image Processing Based on Clustering and Morphological Analysis

Shuanhu Wu and Hong Yan

 

 

Prediction of 3D Structure of Envelope Glycoprotein of Sri Lanka Strain of Japanese Encephalitis Virus

Urmila Kulkarni-Kale & A. S. Kolaskar

 

 

 

 

 

S6. Bioinformatics Database (1)

Oracle's Technology for Bioinformatics and Future Directions

Bruce Blackwell & Siva Ravada

 

 

A new approach to protin structure and function analysis using semi-structured databases

W. Shui, R. Wong, & S. Graham

 

 

Evaluation of unique sequences on the European Data Grid

Ken-ichi Kurata , Vincent Breton, Christian Saguez & Gerard Dine

 

 

 

 

 

S7. Bioinformatics Database (2)

Towards transparent access
to multiple biological databanks

Patrick Lambrix & Vaida Jakonien_e

 

 

BLAST++: A Tool for BLASTing Queries in Batches

Hao Wang, Twee-Hee Ong, Beng Chin Ooi & Kian-Lee Tan

 

 

 

 

 

S8. Applications in Bioinformatics

Inferring an Original Sequence from Erroneous Copies: a Bayesian Approach

Jonathan Keith, Peter Adams & et al.

 

 

Predicting Subcellular Locations of Eukaryotic Proteins Based

Feng Gao, Zhi-Ping Feng, Xiao-Guang Yang & Rui-Yan Luo

 

 

A New Program to Compute the Surface Properties of Biomolecules

Dan V. Nicolau Jr., Florin Fulga, Dan V. Nicolau Sr.

 

 

 

 

 

S9. Short Papers

Novel Elastic Registration For 2-D Medical And Gel Protein Images

Xiu Ying Wang, David Dagan Feng & Hai Hong

 

 

An empirical comparison of supervised machine learning techniques in bioinformatics

Aik Choon TAN & David GILBERT

 

 

On the Robustness of Algorithms for Clustering of Gene Expression Data

Jonas Gamalielesson & Bjorn Olsson

 

 

Bio-informatics Analysis of Proteins in Fat Regulation

Zhongjun Luo

 

 

Let the shoemaker make the shoes – An abstraction layer is needed between bioinformatic analysis, tools, data, and equipment: An agenda for the next 5 years

Tariq Segal & Ross Barnard

 

 

Signals in mRNAs that Influence the Initiation of Translation

Chris M Brown, Grant Jacobs & Mark Schreiber

 

 

 Using text Mining to Predict the Gene Knockout Behaviour of S. Cerevisiae

Patrick Caldon

 

 

  Any query please check with APBC PC Chair Dr. Phoebe Chen at p.chen@qut.edu.au